These plug-ins handle loading and storing of 3D images to the supported image file types.
analyze datapool dicom hdf5 inria mhd nifti vff vista vti vtk
Analyze 7.5 image
Recognized file extensions: .HDR, .hdr
Supported element types: unsigned 8 bit, signed 16 bit, signed 32 bit, floating point 32 bit, floating point 64 bit
Dicom image series as 3D
Recognized file extensions: .DCM, .dcm
Supported element types: signed 16 bit, unsigned 16 bit
HDF5 3D image IO
Recognized file extensions: .H5, .h5
Supported element types: binary data, signed 8 bit, unsigned 8 bit, signed 16 bit, unsigned 16 bit, signed 32 bit, unsigned 32 bit, signed 64 bit, unsigned 64 bit, floating point 32 bit, floating point 64 bit
INRIA image
Recognized file extensions: .INR, .inr
Supported element types: signed 8 bit, unsigned 8 bit, signed 16 bit, unsigned 16 bit, signed 32 bit, unsigned 32 bit, floating point 32 bit, floating point 64 bit
MetaIO 3D image IO using the VTK implementation (experimental).
Recognized file extensions: .MHA, .MHD, .mha, .mhd
Supported element types: signed 8 bit, unsigned 8 bit, signed 16 bit, unsigned 16 bit, signed 32 bit, unsigned 32 bit, floating point 32 bit, floating point 64 bit
NIFTI-1 3D image IO. The orientation is transformed in the same way like it is done with 'dicomtonifti --no-reorder' from the vtk-dicom package.
Recognized file extensions: .NII, .nii
Supported element types: signed 8 bit, unsigned 8 bit, signed 16 bit, unsigned 16 bit, signed 32 bit, unsigned 32 bit, signed 64 bit, unsigned 64 bit, floating point 32 bit, floating point 64 bit
VFF Sun raster format
Recognized file extensions: .VFF, .vff
Supported element types: unsigned 8 bit, signed 16 bit
Vista 3D
Recognized file extensions: .-, .V, .VISTA, .v, .vista
Supported element types: binary data, signed 8 bit, unsigned 8 bit, signed 16 bit, unsigned 16 bit, signed 32 bit, unsigned 32 bit, floating point 32 bit, floating point 64 bit
3D image VTK-XML in- and output (experimental).
Recognized file extensions: .VTI, .vti
Supported element types: signed 8 bit, unsigned 8 bit, signed 16 bit, unsigned 16 bit, signed 32 bit, unsigned 32 bit, floating point 32 bit, floating point 64 bit
3D VTK image legacy in- and output (experimental).
Recognized file extensions: .VTK, .VTKIMAGE, .vtk, .vtkimage
Supported element types: signed 8 bit, unsigned 8 bit, signed 16 bit, unsigned 16 bit, signed 32 bit, unsigned 32 bit, floating point 32 bit, floating point 64 bit
mia-2dmultiimageto3d mia-2dseriestovolume mia-2dto3dimage mia-2dto3dimageb mia-3dbinarycombine mia-3dbrainextractT1 mia-3dcombine-imageseries mia-3dcombine-mr-segmentations mia-3dcost mia-3dcost-translatedgrad mia-3dcrispsegment mia-3ddeform mia-3ddistance-stats mia-3dfield2norm mia-3dfluid mia-3dfluid-syn-registration mia-3dforce mia-3dfuzzysegment mia-3dgetsize mia-3dgetslice mia-3dimageaddattributes mia-3dimagecombine mia-3dimagecreator mia-3dimagefilter mia-3dimagefilterstack mia-3dimageselect mia-3dimagestatistics-in-mask mia-3dimagestats mia-3disosurface-from-volume mia-3dlerp mia-3dmany2one-nonrigid mia-3dmaskseeded mia-3dmotioncompica-nonrigid mia-3dnonrigidreg mia-3dnonrigidreg-alt mia-3dprealign-nonrigid mia-3dpropose-boundingbox mia-3drigidreg mia-3dsegment-ahmed mia-3dsegment-local-cmeans mia-3dserial-nonrigid mia-3dseries-track-intensity mia-3dtransform mia-mesh-deformable-model mia-mesh-to-maskimage mia-raw2volume combiner:3dimage/filter growmask:3dimage/filter image:3dimage/fullcost labelimage:3dimage/fullcost load:3dimage/filter mask:3dimage/filter maskedimage:3dimage/fullcost taggedssd:3dimage/fullcost tee:3dimage/filter