mia-3dimagefilterstack
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mia-3dimagefilterstack

Sysnopis:

mia-3dimagefilterstack {-i io} {-o io} {-t set} [ options ...] [ Plugin type: 3dimage/filter ...]

Description:

This program is used to filter and convert a consecutive numbered series gray of scale images. File names must follow the pattern 'dataXXXX.v' (X being digits), i.e. the numbering comes right before the dot.

Options:

-i, --in-file=(input, required); io

input image(s) to be filtered. For supported file types see Plugin type: 3dimage/io

-o, --out-file=(required, output); io

output file name base, numbers are added accorfing to the input file pattern, and the file extension is added according to the 'type' option.. For supported file types see Plugin type: 3dimage/io

-t, --type=(required); set

output file type Supported values are:(analyze, datapool, dicom, hdf5, inria, mhd, nifti, vff, vista, vti, vtk, )

Help & Info

-V, --verbose=warning; dict

verbosity of output, print messages of given level and higher priorities. Supported priorities starting at lowest level are:

debug:Debug output
message:Normal messages
info:Low level messages
error:Report errors
fatal:Report only fatal errors
trace:Function call trace
warning:Warnings
fail:Report test failures
--copyright=(); bool

print copyright information

-h, --help=(); bool

print this help

-?, --usage=(); bool

print a short help

--version=(); bool

print the version number and exit

Processing

--threads=-1; int

Maxiumum number of threads to use for processing,This number should be lower or equal to the number of logical processor cores in the machine. (-1: automatic estimation).

Example:

Run a mean-least-varaiance filter on a series of images that follow the numbering pattern imageXXXX.hdr and store the output in images filteredXXXX.hdr

mia-3dimagefilterstack -i image0000.hdr -o filtered -t hdr mlv:w=2

Author(s):

Gert Wollny

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