mia-3dfuzzysegment {-i io} [
options
...]
This program runs a combined fuzzy c-means clustering and B-field correction to facilitate a 3D segmentation of 3D image
input image(s) to be segmenetd. For supported file types see Plugin type: 3dimage/io
output class probability images. Note, the used file format must support multible images (best is to use vista). For supported file types see Plugin type: 3dimage/io
image corrected for intensity non-uniformity. For supported file types see Plugin type: 3dimage/io
number of classes
relative residuum
verbosity of output, print messages of given level and higher priorities. Supported priorities starting at lowest level are:
| debug: | Debug output |
| message: | Normal messages |
| info: | Low level messages |
| error: | Report errors |
| fatal: | Report only fatal errors |
| trace: | Function call trace |
| warning: | Warnings |
| fail: | Report test failures |
print copyright information
print this help
print a short help
print the version number and exit
Maxiumum number of threads to use for processing,This number should be lower or equal to the number of logical processor cores in the machine. (-1: automatic estimation).
Run a 5-class segmentation over inpt image input.v and store the class probability images in cls.v and the B0-field corrected image in b0.v.
mia-3dfuzzysegment -i input.v -c 5 -o b0.v -c cls.v
Gert Wollny