mia-3dfluid {-i io} {-r io} {-o io} [
options
...]
This program is used for non-rigid registration based on fluid dynamics as described in:
It uses SSD as the sole registration criterion.
input image. For supported file types see Plugin type: 3dimage/io
reference image . For supported file types see Plugin type: 3dimage/io
output transformation comprising the registering transformation field. For supported file types see Plugin type: 3dtransform/io
save deformed image. For supported file types see Plugin type: 3dimage/io
verbosity of output, print messages of given level and higher priorities. Supported priorities starting at lowest level are:
| debug: | Debug output |
| message: | Normal messages |
| info: | Low level messages |
| error: | Report errors |
| fatal: | Report only fatal errors |
| trace: | Function call trace |
| warning: | Warnings |
| fail: | Report test failures |
print copyright information
print this help
print a short help
print the version number and exit
Maxiumum number of threads to use for processing,This number should be lower or equal to the number of logical processor cores in the machine. (-1: automatic estimation).
disable multi-grid processing
disable processing on the full resolution image
elasticy constant
elasticy constant
initial multigrided size
method for solving PDE
| sora: | Gauss Southwell relexation |
| sor: | successive overrelaxation |
Initial stepsize
image interpolator kernel. For supported plug-ins see Plugin type: 1d/splinekernel
overrelaxation factor vor method sor
maximum iterations
truncation condition
intensity above which real matter is assumed (experimental)
Register image test.v to image ref.v and write the deformation vector field regfield.v. Start registration at the smallest size above 16 pixel.
mia-3dfluid -i test.v -r ref.v -o regfield.v -s 16
Gert Wollny