Plugin type: 2dimage/transform

These plug-ins define creators for 2D transformations.

Plugins:

affine rigid rotation spline translate vf

affine

Affine transformation (six degrees of freedom).. Supported parameters are:

NameTypeDefaultDescription
imgboundaryfactorymirrorimage interpolation boundary conditions. For supported plug-ins see Plugin type: 1d/splinebc
imgkernelfactory[bspline:d=3]image interpolator kernel. For supported plug-ins see Plugin type: 1d/splinekernel

rigid

Rigid transformations (i.e. rotation and translation, three degrees of freedom).. Supported parameters are:

NameTypeDefaultDescription
imgboundaryfactorymirrorimage interpolation boundary conditions. For supported plug-ins see Plugin type: 1d/splinebc
imgkernelfactory[bspline:d=3]image interpolator kernel. For supported plug-ins see Plugin type: 1d/splinekernel
rot-center2dfvector[[0,0]]Relative rotation center, i.e. <0.5,0.5> corresponds to the center of the support rectangle

rotation

Rotation transformations (i.e. rotation about a given center, one degree of freedom).. Supported parameters are:

NameTypeDefaultDescription
imgboundaryfactorymirrorimage interpolation boundary conditions. For supported plug-ins see Plugin type: 1d/splinebc
imgkernelfactory[bspline:d=3]image interpolator kernel. For supported plug-ins see Plugin type: 1d/splinekernel
rot-center2dfvector[[0,0]]Relative rotation center, i.e. <0.5,0.5> corresponds to the center of the support rectangle

spline

Free-form transformation that can be described by a set of B-spline coefficients and an underlying B-spline kernel.. Supported parameters are:

NameTypeDefaultDescription
anisorate2dfvector[[0,0]]anisotropic coefficient rate in pixels, nonpositive values will be overwritten by the 'rate' value.
imgboundaryfactorymirrorimage interpolation boundary conditions. For supported plug-ins see Plugin type: 1d/splinebc
imgkernelfactory[bspline:d=3]image interpolator kernel. For supported plug-ins see Plugin type: 1d/splinekernel
kernelfactory[bspline:d=3]transformation spline kernel.. For supported plug-ins see Plugin type: 1d/splinekernel
penaltyfactory Transformation penalty term. For supported plug-ins see Plugin type: 2dtransform/splinepenalty
ratefloat in [1, inf)10isotropic coefficient rate in pixels

translate

Translation only (two degrees of freedom). Supported parameters are:

NameTypeDefaultDescription
imgboundaryfactorymirrorimage interpolation boundary conditions. For supported plug-ins see Plugin type: 1d/splinebc
imgkernelfactory[bspline:d=3]image interpolator kernel. For supported plug-ins see Plugin type: 1d/splinekernel

vf

This plug-in implements a transformation that defines a translation for each point of the grid defining the domain of the transformation.. Supported parameters are:

NameTypeDefaultDescription
imgboundaryfactorymirrorimage interpolation boundary conditions. For supported plug-ins see Plugin type: 1d/splinebc
imgkernelfactory[bspline:d=3]image interpolator kernel. For supported plug-ins see Plugin type: 1d/splinekernel

Plugin consumers:

mia-2dimageregistration mia-2dmany2one-nonrigid mia-2dmultiimageregistration mia-2dmyoica-full mia-2dmyoicapgt mia-2dmyomilles mia-2dmyoperiodic-nonrigid mia-2dmyoserial-nonrigid mia-2dmyoset-all2one-nonrigid