C3DFVectorfieldRegularizerKernel Class Reference

#include <mia/3d/vfregularizerkernel.hh>

Inheritance diagram for C3DFVectorfieldRegularizerKernel:

Collaboration diagram for C3DFVectorfieldRegularizerKernel:

Data Structures
class	CBuffers

Public Types
typedef std::unique_ptr< CBuffers >	PBuffers
typedef C3DFVectorfield	plugin_data
typedef C3DFVectorfieldRegularizerKernel	plugin_type
typedef std::shared_ptr< C3DFVectorfieldRegularizerKernel >	Pointer
Public Types inherited from CPropertyFlagHolder
typedef std::set< const char * >	Set
	define the type of the set of flags More...

Public Member Functions
	C3DFVectorfieldRegularizerKernel (bool has_pertuberation)
float	evaluate_pertuberation_row (unsigned y, unsigned z, CBuffers &buffers) const
float	evaluate_row (unsigned y, unsigned z, CBuffers &buffers)
float	evaluate_row_sparse (unsigned y, unsigned z, CBuffers &buffers)
unsigned	get_boundary_padding () const
PBuffers	get_buffers () const
bool	has_pertuberation () const
void	set_data_fields (C3DFVectorfield *output, const C3DFVectorfield *input)
void	set_update_fields (const T3DDatafield< unsigned char > *update_flags, T3DDatafield< unsigned char > *set_flags, T3DDatafield< float > *residua, float residual_thresh)
void	start_slice (unsigned z, CBuffers &buffers) const
virtual	~C3DFVectorfieldRegularizerKernel ()
Public Member Functions inherited from CProductBase
const char *	get_init_string () const
void	set_init_string (const char *init)
void	set_module (PPluginModule module)
Public Member Functions inherited from CPropertyFlagHolder
void	add (const char *property)
Set	get_missing_properties (const CPropertyFlagHolder &testset) const
bool	has (const char *property) const
bool	has_all_in (const CPropertyFlagHolder &testset) const
virtual	~CPropertyFlagHolder ()

Static Public Attributes
static const char *	type_descr

Protected Member Functions
const C3DFVectorfield &	get_input_field () const
C3DFVectorfield &	get_output_field () const
T3DDatafield< float > &	get_residua () const
float	get_residual_thresh () const
T3DDatafield< unsigned char > &	get_set_flags () const
const T3DDatafield< unsigned char > &	get_update_flags () const

Detailed Description

Kernel for iterative 3D vector field regularizer

This is the base class for a 3D vector field reguarlizer kernels that is typically used in non-linear registration to evaluate a velocity field from a force field by applying some regularization model on the input data.

Definition at line 41 of file 3d/vfregularizerkernel.hh.

Member Typedef Documentation

PBuffers

typedef std::unique_ptr<CBuffers> C3DFVectorfieldRegularizerKernel::PBuffers

Definition at line 51 of file 3d/vfregularizerkernel.hh.

plugin_data

typedef C3DFVectorfield C3DFVectorfieldRegularizerKernel::plugin_data

Definition at line 44 of file 3d/vfregularizerkernel.hh.

plugin_type

typedef C3DFVectorfieldRegularizerKernel C3DFVectorfieldRegularizerKernel::plugin_type

Definition at line 43 of file 3d/vfregularizerkernel.hh.

Pointer

typedef std::shared_ptr< C3DFVectorfieldRegularizerKernel > C3DFVectorfieldRegularizerKernel::Pointer

Definition at line 55 of file 3d/vfregularizerkernel.hh.

Constructor & Destructor Documentation

C3DFVectorfieldRegularizerKernel()

C3DFVectorfieldRegularizerKernel::C3DFVectorfieldRegularizerKernel

(

bool

has_pertuberation

)

~C3DFVectorfieldRegularizerKernel()

virtual C3DFVectorfieldRegularizerKernel::~C3DFVectorfieldRegularizerKernel ( )

virtual

Member Function Documentation

evaluate_pertuberation_row()

float C3DFVectorfieldRegularizerKernel::evaluate_pertuberation_row	(	unsigned	y,
		unsigned	z,
		CBuffers &	buffers
	)		const

evaluate_row()

float C3DFVectorfieldRegularizerKernel::evaluate_row	(	unsigned	y,
		unsigned	z,
		CBuffers &	buffers
	)

evaluate_row_sparse()

float C3DFVectorfieldRegularizerKernel::evaluate_row_sparse	(	unsigned	y,
		unsigned	z,
		CBuffers &	buffers
	)

get_boundary_padding()

unsigned C3DFVectorfieldRegularizerKernel::get_boundary_padding

(

)

const

get_buffers()

PBuffers C3DFVectorfieldRegularizerKernel::get_buffers

(

)

const

get_input_field()

const C3DFVectorfield & C3DFVectorfieldRegularizerKernel::get_input_field ( ) const

inlineprotected

Definition at line 124 of file 3d/vfregularizerkernel.hh.

get_output_field()

C3DFVectorfield & C3DFVectorfieldRegularizerKernel::get_output_field ( ) const

inlineprotected

Definition at line 118 of file 3d/vfregularizerkernel.hh.

get_residua()

T3DDatafield< float > & C3DFVectorfieldRegularizerKernel::get_residua ( ) const

inlineprotected

Definition at line 130 of file 3d/vfregularizerkernel.hh.

get_residual_thresh()

float C3DFVectorfieldRegularizerKernel::get_residual_thresh ( ) const

inlineprotected

Definition at line 148 of file 3d/vfregularizerkernel.hh.

get_set_flags()

T3DDatafield< unsigned char > & C3DFVectorfieldRegularizerKernel::get_set_flags ( ) const

inlineprotected

Definition at line 142 of file 3d/vfregularizerkernel.hh.

get_update_flags()

const T3DDatafield< unsigned char > & C3DFVectorfieldRegularizerKernel::get_update_flags ( ) const

inlineprotected

Definition at line 136 of file 3d/vfregularizerkernel.hh.

has_pertuberation()

bool C3DFVectorfieldRegularizerKernel::has_pertuberation ( ) const

inline

Definition at line 112 of file 3d/vfregularizerkernel.hh.

set_data_fields()

void C3DFVectorfieldRegularizerKernel::set_data_fields	(	C3DFVectorfield *	output,
		const C3DFVectorfield *	input
	)

set_update_fields()

void C3DFVectorfieldRegularizerKernel::set_update_fields	(	const T3DDatafield< unsigned char > *	update_flags,
		T3DDatafield< unsigned char > *	set_flags,
		T3DDatafield< float > *	residua,
		float	residual_thresh
	)

start_slice()

void C3DFVectorfieldRegularizerKernel::start_slice	(	unsigned	z,
		CBuffers &	buffers
	)		const

Field Documentation

type_descr

const char* C3DFVectorfieldRegularizerKernel::type_descr

static

Definition at line 53 of file 3d/vfregularizerkernel.hh.

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The documentation for this class was generated from the following file:

• 3d/vfregularizerkernel.hh