segsetwithimages.hh

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/* -*- mia-c++  -*-
 *
 * This file is part of MIA - a toolbox for medical image analysis 
 * Copyright (c) Leipzig, Madrid 1999-2017 Gert Wollny
 *
 * MIA is free software; you can redistribute it and/or modify
 * it under the terms of the GNU General Public License as published by
 * the Free Software Foundation; either version 3 of the License, or
 * (at your option) any later version.
 *
 * This program is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 * GNU General Public License for more details.
 *
 * You should have received a copy of the GNU General Public License
 * along with MIA; if not, see <http://www.gnu.org/licenses/>.
 *
 */

#ifndef mia_2d_SegSetWithImages_hh
#define mia_2d_SegSetWithImages_hh


#include <mia/core/iohandler.hh>

#include <mia/2d/segset.hh>
#include <mia/2d/image.hh>

NS_MIA_BEGIN

class CXMLElement;
class CXMLDocument; 
class EXPORT_2D CSegSetWithImages: public CSegSet {
public:
        static const char *data_descr;  
        typedef CSegSetWithImages type; 
        typedef std::shared_ptr<CSegSetWithImages> Pointer; 
        
        CSegSetWithImages();

        CSegSetWithImages(int version);


        CSegSetWithImages(const CXMLDocument& node, const std::string& fileroot); 
        

        CSegSetWithImages(const std::string& filename, bool ignore_path);

        const C2DImageSeries& get_images()const;

        void set_images(const C2DImageSeries& series); 
        
        void save_images(const std::string& root) const; 


        using CSegSet::add_frame; 
        void add_frame(const CSegFrame& frame, P2DImage image); 
        
        CSegSetWithImages crop(const C2DIVector&  start, const C2DIVector&  end,
                               const std::string& crop_filename_base);

        CSegSetWithImages *clone() const; 
private:
        C2DImageSeries m_images;
};

typedef CSegSetWithImages::Pointer PSegSetWithImages; 

extern template class EXPORT_2DMYOCARD TPlugin<CSegSetWithImages, io_plugin_type>;
extern template class EXPORT_2DMYOCARD TIOPlugin<CSegSetWithImages>; 

typedef TIOPlugin<CSegSetWithImages> CSegSetWithImagesIOPlugin;
typedef THandlerSingleton< TIOPluginHandler<CSegSetWithImagesIOPlugin > > CSegSetWithImagesIOPluginHandler;

template <> 
struct IOHandler_of<CSegSetWithImages> {
        typedef CSegSetWithImagesIOPluginHandler type;
}; 



NS_MIA_END

#endif