mia-raw2volume

Sysnopis:

mia-raw2volume {-i string} {-o io} {-s 3dbounds} [ options ...]

Description:

This program is used to convert raw data into 3D images with apropriate metadata.

Options:

-i, --in-file=(input, required); string

input file name

-o, --out-file=(output, required); io

output file name. For supported file types see Plugin type: 3dimage/io

-r, --repn=ubyte; dict

input pixel type

none:no pixel type defined
float:floating point 32 bit
sbyte:signed 8 bit
ulong:unsigned 64 bit
double:floating point 64 bit
sint:signed 32 bit
ushort:unsigned 16 bit
sshort:signed 16 bit
uint:unsigned 32 bit
slong:signed 64 bit
bit:binary data
ubyte:unsigned 8 bit
-b, --big-endian

input data is big endian

-f, --scale=[1,1,1]; 3dfvector

scale of input voxels <FX,FY,FZ>

-k, --skip=0; ulong

skip number of bytes from beginning of file

-s, --size=(required); 3dbounds

size of input <NX,NY,NZ>

Help & Info

-V, --verbose=warning; dict

verbosity of output, print messages of given level and higher priorities. Supported priorities starting at lowest level are:

info:Low level messages
trace:Function call trace
fail:Report test failures
warning:Warnings
error:Report errors
debug:Debug output
message:Normal messages
fatal:Report only fatal errors
--copyright=(); bool

print copyright information

-h, --help=(); bool

print this help

-?, --usage=(); bool

print a short help

--version=(); bool

print the version number and exit

Processing

--threads=-1; int

Maxiumum number of threads to use for processing,This number should be lower or equal to the number of logical processor cores in the machine. (-1: automatic estimation).

Example:

pixel size of <1.2, 2.3, 3.4> to an Analyze file image.hdr

mia-raw2volume -i data.raw -o image.hdr -s "<10,20,30>" -k "<1.2,2.3,3.4>" -r ushort

Author(s):

Gert Wollny