segset.hh

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/* -*- mia-c++  -*-
 *
 * This file is part of MIA - a toolbox for medical image analysis 
 * Copyright (c) Leipzig, Madrid 1999-2017 Gert Wollny
 *
 * MIA is free software; you can redistribute it and/or modify
 * it under the terms of the GNU General Public License as published by
 * the Free Software Foundation; either version 3 of the License, or
 * (at your option) any later version.
 *
 * This program is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 * GNU General Public License for more details.
 *
 * You should have received a copy of the GNU General Public License
 * along with MIA; if not, see <http://www.gnu.org/licenses/>.
 *
 */

#ifndef SegSet_h
#define SegSet_h

#include <mia/core/ioplugin.hh>
#include <mia/core/xmlinterface.hh>
#include <mia/2d/segframe.hh>
#include <mia/2d/boundingbox.hh>

NS_MIA_BEGIN



class EXPORT_2D CSegSet: public CIOData {
public:
        typedef std::vector<CSegFrame> Frames;

        CSegSet();
        CSegSet(const std::string& src_filename);

        CSegSet(const CXMLDocument& node);


        CSegSet(int version);
        void add_frame(const CSegFrame& frame);

        CXMLDocument write() const;


        const Frames& get_frames()const;

        Frames& get_frames();

        const C2DBoundingBox get_boundingbox() const;

        void rename_base(const std::string& new_base); 


        CSegSet  shift_and_rename(size_t skip, const C2DFVector&  shift, const std::string& new_filename_base)const;

        void transform(const C2DTransformation& t);


        void set_RV_peak(int peak); 
        
        int get_RV_peak() const; 

        void set_LV_peak(int peak); 

        int get_LV_peak() const; 

        int get_preferred_reference() const; 


        void  set_preferred_reference(int value); 

private:
        void read(const CXMLDocument& node);
        Frames m_frames;
        int m_RV_peak; 
        int m_LV_peak; 
        int m_preferred_reference; 
        int m_version; 
};


NS_MIA_END

#endif