mia-3dgetslice {-i io} {-o io} [
options
...]
This program is used to extract 2D slices from a 3D data set and store them in separate files. Output files will be numbered according to their slice index.
input image(s) to be filtered. For supported file types see Plugin type: 3dimage/io
output image(s) base name, give without extension since this will be based on the '--type' option. For supported file types see Plugin type: 2dimage/io
output file type
start slice number
number of slices (all=0)
slice direction (xy=axial, xz=coronal, yz=saggital)
| xz: | get xz (coronal) slice |
| yz: | get yz (saggital) slice |
| xy: | get xy (axial) slice |
verbosity of output, print messages of given level and higher priorities. Supported priorities starting at lowest level are:
| info: | Low level messages |
| trace: | Function call trace |
| fail: | Report test failures |
| warning: | Warnings |
| error: | Report errors |
| debug: | Debug output |
| message: | Normal messages |
| fatal: | Report only fatal errors |
print copyright information
print this help
print a short help
print the version number and exit
Store 5 coronal slices starting at slice 120 coronalXXXX.png from image.v.
mia-3dgetslice -i image.v -o coronal -t png -n 5 -s 120