mia-2dseriestovolume {-i string} {-o io} [ options ...]


Obtaines a 3D volume image by combining the images of the segmentation set.


-i, --in-file=(input, required); string

input segmentation set

-o, --out-file=(required, output); io

output 3D image . For supported file types see Plugin type: 3dimage/io

-k, --skip=0; ulong

number of frames to skip at the beginning of the series.

Help & Info

-V, --verbose=warning; dict

verbosity of output, print messages of given level and higher priorities. Supported priorities starting at lowest level are:

debug:Debug output
message:Normal messages
info:Low level messages
error:Report errors
fatal:Report only fatal errors
trace:Function call trace
fail:Report test failures
--copyright=(); bool

print copyright information

-h, --help=(); bool

print this help

-?, --usage=(); bool

print a short help

--version=(); bool

print the version number and exit


--threads=-1; int

Maxiumum number of threads to use for processing,This number should be lower or equal to the number of logical processor cores in the machine. (-1: automatic estimation).


Create the volume volume.v from the series series.set but skip the first two images.

mia-2dseriestovolume -i series.set -k 2 -o volume.v


Gert Wollny