mia-2dmyoseries-dice

Sysnopis:

mia-2dmyoseries-dice {-i string} [ options ...]

Description:

This program is used to evaluate the per-frame dice index of segmented regions of an image with respect to the segmentation of a reference frame from the same series.

Options:

-i, --input=(input, required); string

original segmentation set

-k, --skip=2; int

images to skip atthe bgin of the series

-r, --reference=20; ulong

reference image

Help & Info

-V, --verbose=warning; dict

verbosity of output, print messages of given level and higher priorities. Supported priorities starting at lowest level are:

info:Low level messages
trace:Function call trace
fail:Report test failures
warning:Warnings
error:Report errors
debug:Debug output
message:Normal messages
fatal:Report only fatal errors
--copyright=(); bool

print copyright information

-h, --help=(); bool

print this help

-?, --usage=(); bool

print a short help

--version=(); bool

print the version number and exit

Processing

--threads=-1; int

Maxiumum number of threads to use for processing,This number should be lower or equal to the number of logical processor cores in the machine. (-1: automatic estimation).

Example:

Evaluate the dice index of segmentation set segment.set with reference 30 and skipping the first two frames.

mia-2dmyoseries-dice -i segment.set -r 30 -k 2

Author(s):

Gert Wollny