mia-2dimagestats {-i io} [ options ...]


This progranm is used to evaluate some statistics of an image. Output is Mean, Variation, Median, and Median Average Distance of the intensity values. The program allows one to set a lower threshold and to cut off a percentage of the high intensity pixels


-i, --in-file=(input, required); io

input image to be analyzed. For supported file types see Plugin type: 2dimage/io

-t, --thresh=10; float

intensity thresh to ignore

-g, --high-thresh=0.05; float

upper histogram percentage to ignore


Use a histogram to accumulate statistics

Help & Info

-V, --verbose=warning; dict

verbosity of output, print messages of given level and higher priorities. Supported priorities starting at lowest level are:

info:Low level messages
trace:Function call trace
fail:Report test failures
error:Report errors
debug:Debug output
message:Normal messages
fatal:Report only fatal errors
--copyright=(); bool

print copyright information

-h, --help=(); bool

print this help

-?, --usage=(); bool

print a short help

--version=(); bool

print the version number and exit


--threads=-1; int

Maxiumum number of threads to use for processing,This number should be lower or equal to the number of logical processor cores in the machine. (-1: automatic estimation).


Evaluate the statistics of image input.png. Don't include the upper 1% of intensities in the statistics. The result is written to stdout

mia-2dimagestats -i input.png -g 1


Gert Wollny